pysraweb - Search GEO and SRA Datasets

MCP ServerWe offer a remote Model Context Protocol (MCP) server that enables LLM chat clients to use pysraweb's features. This provides easy and intuitive access to exploring datasets from GEO and SRA.

Connect your LLM client using this URL: https://pysraweb.saketlab.org/api/mcp

Setup Guide for Claude Desktop

1. Download and install the Claude Desktop app2. Open the Claude Desktop configuration file by going to Settings → Developer → Edit Config3. Add the following configuration to the mcpServers section:

"mcpServers": {
  "pysraweb": {
    "command": "npx",
    "args": ["-y", "mcp-remote", "https://pysraweb.saketlab.org/api/mcp"]
  }
}

4. Restart Claude Desktop to apply the changesOnce configured, you'll be able to search and explore GEO and SRA datasets directly from Claude Desktop conversations.